Welcome to the Bio3D wiki!
Bio3D is an R package containing utilities for the analysis of protein structure and sequence data. It is currently distributed as platform independent source code under a GPL version 2 license.
Visit the Main Bio3d Site for further information, Installation instructions, Quick start guide and full Documentation.
This site contains the following sections:
| Tutorials | worked examples of bio3d usage |
| Manual | complete R style package manual |
| Vignette | task-oriented introduction to the bio3d |
| Utility Programs | a description of additional programs that may prove useful |
| Recent Changes | details of recent additions and changes between versions |
| Developer Notes | a to do list for developers |
| User Suggestions | a page for users to add their suggestions for changes, additions and workarounds |
| Old Versions | older versions of the package can be obtained here |
Other pages include:
General
- Home - a link to the main bio3d pages
- Installing Bio3d - installation instructions.
- R notes - an introductory guide to R (still rather basic, but some day...)
- Why R? - some comments in response to a common question.
- R command summary - quick reference to common R commands/functions
- Quick start guide - get off to a quick start with bio3d
- User Guide - introductory guide to basic bio3d usage
- Documentation - full online documentation for bio3d functions
- Wiki notes - getting started with adding content to this wiki
Contact: Barry
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