To Do Notes

• New functions to add
• Existing functions to improve
• Documentation to add or improve
• Web site issues and improvements
• package manual and vignettes to include

Priorities

1. write paper DONE
2. mail Leo DONE
3. mail Karim DONE
4. make bio3d web site DONE
5. make windows executable DONE (see Windows page)
6. tidy package vingnette (see dvi file in bio3d.Rcheck dir)
7. update package CITATION file in the 'inst' subdirectory, ... see citEntry()
8. write bio3d wiki tutorals (add more notes to the wiki about Leo's ccbp tutoral)
9. add more functions ( -dssp-, -stride-, -torsions-, -seqaln-, -aaindex-, hbond, ... see the New functions page)
10. improve existing functions (see Existing functions page)
11. upload to CRAN
12. upload to NBCR

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